- 追加された行はこの色です。
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#author("2020-03-11T12:56:41+09:00","","")
*Welcome to ChemTHEATRE Wiki!! [#r7b6c7ba]
#author("2020-06-17T16:23:55+09:00","","")
RIGHT:&size(18){ [[Japanese Ver. :https://chem-theatre.com/pukiwiki/index.php?FrontPage]]};
- Back to [[ChemTHEATRE:http://chem-theatre.com/]]
- For inquiry: [[mail to ChemTHEATRE :info@chem-theatre.com]]
*&size(30){Welcome to ChemTHEATRE Wiki!}; [#d02c462a]
-Back to [[ChemTHEATRE (Database) :https://chem-theatre.com/]]~
~
-For inquiry: [[mail to ChemTHEATRE :info@chem-theatre.com]]~
~
*About ChemTHEATRE [#c62e174b]
#ref(pukiwiki.png)
''Chemicals in the THEATRE:Tractable and Heuristic E-Archive for Traceability and Responsible-care Engagement''
-ChemTHEATRE stores the environmental monitoring data scattered in the published papers and reports ''in one database''. ~
~
-ChemTHEATRE stores the valuable data in ''tsv file'', which is ''simple'' and ''easy to use for analysis''. ~
-ChemTHEATRE stores the environmental monitoring data scattered in the published papers and reports in one database. ~
- Easy to download the monitoring data in text style~
-ChemTHEATRE stores the valuable data in tsv file, which is easy to use for analysis. ~
For Details of ChemTHEATRE => [[About:https://chem-theatre.com/about]]
*Contents [#rb239a3a]
-[[How to register your data>#vf99df61]]~
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-[[Advantages of submitting your data to ChemTHEATRE>#s21522c3]]~
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-[[Advantages of utilizing the data stored in ChemTHEATRE>#i6134f1c]]~
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-[[What kind of information are stored in ChemTHEATRE?>#s877739d]]~
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-[[How to search the data you need>#na183810]]~
~
-[[How to export>#vf779dbf]]~
~
*How to register your data [#vf99df61]
**1. Send an e-mail to register@chem-theatre.com [#bc4e7e92]
-As attached files:~
--your paper(including supporting info.): pdf~
--Measured values and LOD (Limit Of Detection)：excel~
--Sample info.(Collection date, Collection place, Latitude and Longitude, etc.)：excel~
~
~That is all you have to do.~
**2. At ChemTHEATRE, the original data are tailored to ChemTHEATRE's format. [#tedf9bfa]
-In this process,~
Person in charge of registration reads your paper, checks the data and metadata thoroughly to dig up the data necessary for ChemTHEATRE.~
↓~
ChemTHEATRE is sure to contact the submitter/corresponding author to clear up doubts, if any.
**3. Upload the data to ChemTHEATRE [#r633b0d2]
**4. Notice saying the completion of registration will be sent to the submitter. [#zb3cf73a]
-Attached with an excel file including all of your data and metadata registered in ChemTHEATRE, together with the original data.~
~
*Advantages of submitting your data to ChemTHEATRE [#s21522c3]
** Your paper has more chance to be read, cited or used [#rb03671f]
** Your valuable data have more chance to be utilized in society [#i8ddeb51]
- ChemTHEATRE stores all the data in text style and allow users to export them in text style.~
=>This encourages researchers to utilize your data for modeling or risk assessment since ChemTHEATRE eliminates the time-consuming tasks such as converting the data in pdf or excel to text.
** Your papers have more chance to be read, cited or used [#rb03671f]
-Your on-line paper is ''only one click away!'' doi of your paper is shown in ChemTHEATRE.~
** You can use ChemTHEATRE as your online storage [#he45aa0f]
- You never lose your data and metadata, even after your students or researchers leave your lab.
- You won't lose your data, even though your PCs are broken or lost.~
**Easy access to your own data as well as data provided by other researchers [#x5fdf55c]
- You can reach your data anytime and anywhere since ChemTHEATRE stores your data online.~
** You can use ChemTHEATRE as your ''online storage'' [#he45aa0f]
- You ''never lose'' your data and metadata, even after your students or researchers leave your lab. ~
~
- You ''won't lose'' your data, even though your PCs are broken or lost.~
~
- You can reach your data ''anytime and anywhere.''~
~
~
**Easy access to your own data as well as data provided by other researchers for further research [#x5fdf55c]
- You can review old data whenever you need.~
~
- It is easy to follow change of a chemical concentration over the years.~
~
**You can save time! [#r283d27f]
- ChemTHEATRE check the individual data before registration and store your data properly for you.
- You can use your time for your further research since ChemTHEATRE carry out the time-consuming task.
- ChemTHEATRE checks the individual data for you before registration and store your data properly.~
- ChemTHEATRE store your monitoring data, metadata such as sample info. and your paper/report as one project.~
- You can use your time for your further research since ChemTHEATRE carry out the time-consuming task.~
~
- ChemTHEATRE stores your monitoring data, metadata such as sample info. and your paper/report as one project.~
~
~
#ref(chemwiki_figures_eng.png)
~
--&size(20){ What is metadata?};
---&size(16){Sample information};~
（Collection year / month / day, collection region / country / area, latitude and longitude, pH, temperature, water temperature, water depth, sediment depth, scientific name, sex, growth stage, weight, length, etc.）~
For details about samples =>[[Samples>Samples]]~
~
---&size(16){Methods}; ~
For details about Experiments => [[Experiments>Experiments]]~
~
---&size(16){Chemical information}; ~
For Details about Chemicals => [[Chemicals>Chemicals]]~
~
#ref(CTstorage_image.png)
*Advantages of utilizing the data stored in ChemTHEATRE [#i6134f1c]
**Easy to use for modeling or assessment [#n2ed2835]
- All the data are stored in unified format (text style)
- Unified unit ~
--water : μg/L~
--biotic / soil / sediment : ng/g~
--メタデータとは・・・
---使用したサンプルの情報
（採取年月日、採取場所の情報（緯度経度、地名など）pH, 水温、気温、深度、学名、性別、成熟度、臓器・組織名、体長、重量など）~
→詳しくは[[Samplesテーブル>Samples]]
---測定方法・条件~
→詳しくは[[Experimentsテーブル>Experiments]]
---化学物質情報など~
→詳しくは[[Chemicalsテーブル>Chemicals]]
**Actual measured values [#k83aa365]
-ChemTHEATRE stores and opens actual measured values even though the original paper provided only the mean values.
**Reliable information and data [#nf177794]
-ChemTHEATRE checks all the data and metadata before registration. ~
-ChemTHEATRE ask any question to the submitter / corresponding author no matter how trivial the question is.~
**You can narrow down the data by a place, a chemical, a sampling year, etc. and view the data. [#h7c4b3ba]
-You can narrow down the data by selecting a place, a chemical, a sampling year, etc as search parameters.
-You can export the data you need easily in text style.
*ChemTHEATRE収録データ活用の利点 [#d35ee4c8]
**統一のフォーマット、統一した単位で掲載しているので使い勝手がよい[#i2b1b23f]
-水:μg/L, 生物/土/底質: ng/g など
**論文等では「平均値」などでまとめられているデータもここでは実測値を収録 [#hd85f643]
**登録時に第三者がデータやメタデータをチェックし、確実な情報とデータのみを収録 [#r07bf592]
**場所、化学物質、時間といった様々なフィルターをかけてデータを閲覧可能 [#n776409b]
-検索条件を入れることで膨大なデータを絞り込み。必要な情報をピンポイントに抽出、tsvファイルでエクスポートが可能
**経年、物質ごと、地域ごとの比較研究が容易に [#hdc9eb6e]
**Easy to compare data by year, by chemical, by region [#hdc9eb6e]
*データ登録の流れ [#vf99df61]
**1. register@chem-theatre.com へメール [#k448bc02]
-添付する物:~
--論文(supporting infoもあれば): pdfなど~
--測定値と検出下限値(生データ)：excelなど~
--サンプルの情報(採取年月日、採取地点の緯度経度など)：excelなど~
*What kind of information are stored in ChemTHEATRE? [#s877739d]
- [[Submitter Table>Submitters]]
-[[Projects Table>Projects]]
-[[Samples Table>Samples]]
-[[Experiments Table>Experiments]]
-[[Chemicals Table>Chemicals]]
**2. 登録担当者が論文、生データを元にChemTHEATREのフォーマットに加工 [#tedf9bfa]
-正確を期すため、この段階で不明箇所等を提供者へ問合せ
*How to search the data you need [#na183810]
-[[Search by Project:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_Eng_ProjectSearch.pdf&refer=FrontPage_English]]
-[[Search by Sample:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_Eng_SampleSearch.pdf&refer=FrontPage_English]]
-[[Search by Chemical:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_Eng_ChemicalSearch.pdf&refer=FrontPage_English]]
**3. ChemTHEATREへアップロード [#r633b0d2]
*How to export [#vf779dbf]
You can easily download the measured data, sample information you need. (tsv file)
-[[Export data:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_Eng_Export.pdf&refer=FrontPage_English]]~
~
*Site policy [#a29f404d]
Please read site policy before you use ChemTHEATRE.~
-[[Site Policy :https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_EngSitePolicy.pdf&refer=FrontPage_English]]~
~
*Track record (conference presentations, etc) [#e9267ffa]
**4. 登録完了通知と共に、データ提供者にはデータ、メタデータを１つのエクセルファイルにまとめて返却 [#zb3cf73a]
*ChemTHEATREにはどんな情報が登録されている？ [#s877739d]
- [[Submitterテーブル>Submitters]]
-[[Projectsテーブル>Projects]]
-[[Samplesテーブル>Samples]]
-[[Experimentsテーブル>Experiments]]
-[[Chemicalsテーブル>Chemicals]]
*データ検索の仕方 [#na183810]
-[[プロジェクトからさがす:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_projectsearch20200214.pdf&refer=test]]
-[[サンプルからさがす:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_samplesearch20200214.pdf&refer=test]]
-[[化学物質からさがす:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_chemicalsearch20200214.pdf&refer=test]]
*エクスポート機能 [#vf779dbf]
必要なサンプル情報、測定値情報をtsvファイルでダウンロード可能
-[[エクスポートの仕方:https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_export20200214.pdf&refer=test]]
*サイトを利用するにあたり [#a29f404d]
-[[サイトポリシー :https://chem-theatre.com/pukiwiki/index.php?plugin=attach&pcmd=open&file=ChemTHEATRE_Manual_sitepolicy_20200129rev.pdf&refer=test]]
*学会等での発表 [#e9267ffa]
![[PukiWiki]](image/pukiwiki.png "[PukiWiki]")
